MRIQC: individual T1w report

Summary

  • BIDS filename: sub-4040_ses-1_T1w.
  • Date and time: 2022-11-02, 20:24.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5142341117608692
cnr2.47018197314957
efc0.5605576826029071
fber1859.0296285543782
fwhmavg4.46017
fwhmx4.32093
fwhmy5.09711
fwhmz3.96247
icvscsf0.19955458510813165
icvsgm0.4004909619658044
icvswm0.3999544529260639
inumed1.8109946250915527
inurange0.8420827150344847
qi10.0005836272931540479
qi20.0019601064329445323
rpvecsf27.745996482234315
rpvegm14.27443282017811
rpvewm17.41260408257585
sizex176
sizey256
sizez256
snrcsf3.0015087462402255
snrgm9.936006502993948
snrtotal11.617660893454056
snrwm21.915467431127993
snrdcsf39.27390948281029
snrdgm81.00342465376866
snrdtotal74.93174495098266
snrdwm104.51790071636906
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk74.42862977986393
summarybgmad6.268174043410927
summarybgmean13.03422608423994
summarybgmedian10.629945278167725
summarybgn2307746.0
summarybgp054.2278191447258
summarybgp9528.930362433195114
summarybgstdv11.377212674988222
summarycsfk8.054160695977295
summarycsfmad120.93098636609224
summarycsfmean404.4554190317064
summarycsfmedian375.76252584159374
summarycsfn20448.0
summarycsfp05245.63629230856895
summarycsfp95622.9178131714461
summarycsfstdv125.18815344233374
summarygmk0.11069614764014046
summarygmmad74.32263508615813
summarygmmean779.5262348700264
summarygmmedian775.0196466445923
summarygmn14994.0
summarygmp05656.5380349844695
summarygmp95917.2767012521624
summarygmstdv77.99851999434496
summarywmk0.5259409517191811
summarywmmad41.36994868651212
summarywmmean1001.141195336481
summarywmmedian1000.000022560358
summarywmn226263.0
summarywmp05926.4359694421291
summarywmp951078.6978560686111
summarywmstdv45.62977339555737
tpmoverlapcsf0.17168927192687988
tpmoverlapgm0.45200270414352417
tpmoverlapwm0.5170754194259644
wm2max0.5341685854057716
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime12:49:33.495000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20220720
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.028359, 0.954774, 0.295977, -0.0131024, 0.296425, -0.954966]
ImageOrientationTextSag>Cor(1.3)>Tra(1.2)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.259
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NonlinearGradientCorrectionTrue
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0313783
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber19
ShimSetting[2617, 5468, -7526, -123, -10, -633, 245, -223]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp240.44
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sumf3fe1af80022ded433d530403bd1e6c0
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.